Package: archiDART 3.4

Benjamin M Delory

archiDART: Plant Root System Architecture Analysis Using DART and RSML Files

Analysis of complex plant root system architectures (RSA) using the output files created by Data Analysis of Root Tracings (DART), an open-access software dedicated to the study of plant root architecture and development across time series (Le Bot et al (2010) "DART: a software to analyse root system architecture and development from captured images", Plant and Soil, <doi:10.1007/s11104-009-0005-2>), and RSA data encoded with the Root System Markup Language (RSML) (Lobet et al (2015) "Root System Markup Language: toward a unified root architecture description language", Plant Physiology, <doi:10.1104/pp.114.253625>). More information can be found in Delory et al (2016) "archiDART: an R package for the automated computation of plant root architectural traits", Plant and Soil, <doi:10.1007/s11104-015-2673-4>.

Authors:Benjamin M Delory, Caroline Baudson, Yves Brostaux, Guillaume Lobet, Patrick du Jardin, Loic Pages, Pierre Delaplace

archiDART_3.4.tar.gz
archiDART_3.4.zip(r-4.7)archiDART_3.4.zip(r-4.6)archiDART_3.4.zip(r-4.5)
archiDART_3.4.tgz(r-4.6-any)archiDART_3.4.tgz(r-4.5-any)
archiDART_3.4.tar.gz(r-4.7-any)archiDART_3.4.tar.gz(r-4.6-any)
archiDART_3.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
archiDART/json (API)

# Install 'archiDART' in R:
install.packages('archiDART', repos = c('https://archidart.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/archidart/archidart/issues

On CRAN:

Conda:

4.23 score 3 stars 14 scripts 297 downloads 4 mentions 10 exports 54 dependencies

Last updated from:d6e1645001. Checks:7 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR204
source / vignettesOK228
linux-release-x86_64ERROR211
macos-release-arm64ERROR121
macos-oldrel-arm64ERROR134
windows-develERROR127
windows-releaseERROR196
windows-oldrelERROR125
wasm-releaseOK169

Exports:archidrawarchigrowarchitectbottleneckdistdartToTablelatdistperhomologyrootrsmlToTabletrajectory

Dependencies:abindbase64encBHbslibcachemclicpp11digestevaluatefarverfastmapFNNfontawesomefsgeometrygluegtoolshighrhtmltoolshtmlwidgetsigraphjquerylibjsonliteknitrlabelinglatticelifecyclelinproglpSolvemagicmagrittrMatrixmemoisemimepkgconfigR6rappdirsRColorBrewerRcppRcppEigenRcppProgressrglrlangrmarkdownsassscalesspTDAtinytexvctrsviridisLitexfunXMLyaml