Package: archiDART 3.4

Benjamin M Delory

archiDART: Plant Root System Architecture Analysis Using DART and RSML Files

Analysis of complex plant root system architectures (RSA) using the output files created by Data Analysis of Root Tracings (DART), an open-access software dedicated to the study of plant root architecture and development across time series (Le Bot et al (2010) "DART: a software to analyse root system architecture and development from captured images", Plant and Soil, <doi:10.1007/s11104-009-0005-2>), and RSA data encoded with the Root System Markup Language (RSML) (Lobet et al (2015) "Root System Markup Language: toward a unified root architecture description language", Plant Physiology, <doi:10.1104/pp.114.253625>). More information can be found in Delory et al (2016) "archiDART: an R package for the automated computation of plant root architectural traits", Plant and Soil, <doi:10.1007/s11104-015-2673-4>.

Authors:Benjamin M Delory, Caroline Baudson, Yves Brostaux, Guillaume Lobet, Patrick du Jardin, Loic Pages, Pierre Delaplace

archiDART_3.4.tar.gz
archiDART_3.4.zip(r-4.5)archiDART_3.4.zip(r-4.4)archiDART_3.4.zip(r-4.3)
archiDART_3.4.tgz(r-4.4-any)archiDART_3.4.tgz(r-4.3-any)
archiDART_3.4.tar.gz(r-4.5-noble)archiDART_3.4.tar.gz(r-4.4-noble)
archiDART_3.4.tgz(r-4.4-emscripten)archiDART_3.4.tgz(r-4.3-emscripten)
archiDART.pdf |archiDART.html✨
archiDART/json (API)

Peer review:

Bug tracker:https://github.com/archidart/archidart/issues

On CRAN:

10 exports 2 stars 1.83 score 56 dependencies 4 mentions 13 scripts 435 downloads

Last updated 4 years agofrom:d6e1645001. Checks:OK: 1 ERROR: 6. Indexed: yes.

Exports:archidrawarchigrowarchitectbottleneckdistdartToTablelatdistperhomologyrootrsmlToTabletrajectory

Dependencies:abindbase64encBHbslibcachemclicolorspacecpp11digestevaluatefarverfastmapFNNfontawesomefsgeometrygluegtoolshighrhtmltoolshtmlwidgetsigraphjquerylibjsonliteknitrlabelinglatticelifecyclelinproglpSolvemagicmagrittrMatrixmemoisemimemunsellpkgconfigR6rappdirsRColorBrewerRcppRcppEigenRcppProgressrglrlangrmarkdownsassscalesspTDAtinytexvctrsviridisLitexfunXMLyaml